2ADC Dark blue chords indicate the 0 nested

Transkript

2ADC Dark blue chords indicate the 0 nested
U
U
C
U
C
B
B
U
C
U
C
C
B
U
U
C
5
5 32
53 34
6
U
C
B
ain
C
Cha
in B
C
C
C
U
U
U
U
U
ha
in
U
Ch
ain
C
U
Ch
C
U
536
C
U
U
U
53
8
54
54 1
3
534
536
C
C
U
538
541
543
C
U
B
C
532
534
C
U
B
C
U
532
C
Chain C
Chain B
543
541
538
536
534
532
C
U
C
U
C
C
U
8
U
C
U
U
C
U
C
1
54 43
5
ain
B
U
C
C
U
U
C
U
U
Ch
C
U
U
C
U
U
C
U
Cha
C
ain
C
U
B
C
C
2
53 4
53 6
53
C
U
54
54 3
1
53
8
C
B
8
U
U
53
C
C
Chain
in B
Cha
53
5
5 36
53 34
2
5
B
C
C
C
ain
C
C
3
54 41
5
Ch
5431
54
8
53
C
Ch
C
36
4
53 2
53
in
B
C
C
B
ha
C
ain
Ch
C
ain
ain
Ch
2ADC
8
53
5413
54
Ch
C B
in B
U
in B
536
534
532
U
C
U
532
534
536
C
C
U
C
U
C
U
Cha
C
U
Chain C
543
541
538
B
U
B C
538
541
543
C
U
U
C
U
U
C
U
C
U
C
532
534
536
C
U
C
U
C
U
543
541
Chain C
U
C
U
C
U
C
U
U
U
536
534
532
CB
Chain C
U
C
U
C
C
U
U
C
U
U
5431
54
538
B
C
Cha
in B
U
C
in C
U
U
a
C
U
6
53 4
53 2
53
C
C
C
53
54
54 1
3
C
B
U
U
8
Ch
ain
U
C
nB
U
U
U
C
U
U
C
U
C
U
U
U
U
U
U
U
U
U
C
C
U
U
U
U
C
C
C
C
U
C
U
C
C
C
C
C
B
C
in B
Chain C
ain
541
543
Cha
536
534
532
C
543
541
538
C
Chain C
B
C
ain
U
U
Ch
536
534
532
C
534
536
C
U
538
ain
C
B
B
in
Ch
U
B
C
C
532
ain
U
U
U
U
538
541
543
5
53
8
C
C
C
C
Ch
B
C
Chain B
Ch
U
in
B
C
ha
ha
U
U
U
U
ain
C
C
2
53 4
53 6
53
5
5 36
53 34
2
C
C
C
1
54 43
5
U
C
Ch
C
B
C
C
8
U
in B
C
C
B
C
5
5 32
53 34
6
53
3
54 41
5 8
53
Cha
C
54
3
41
i
a
Ch
532
534
536
C
U
C
Ch
538
541
543
C
C
in B
Chain B
53
5
U
B C
538
Cha
C
C B
B
U
536
534
532
Chain B
Chain
U
C
C
Dark blue chords indicate the 0 nested Watson−Crick basepairs
Red chords indicate the 0 non−nested Watson−Crick basepairs
Cyan chords indicate the 1 nested non−Watson−Crick basepairs
Green chords indicate the 0 non−nested non−Watson−Crick basepairs
Yellow chords indicate the 10 stacking interactions
Magenta chords indicate the 23 base−phosphate interactions
Orange chords indicate the 9 base−ribose interactions